Cluster: ShaoY_2019_ERR3405884_bin.3_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405884_bin.3
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405884_bin.3_k141_7964 | ShaoY_2019_ERR3405884_bin.3_k141_7964_4 | 1504 | 3150 | + | GH2 |
| pfam | ShaoY_2019_ERR3405884_bin.3_k141_7964 | ShaoY_2019_ERR3405884_bin.3_k141_7964_5 | 3184 | 4629 | + | NAPRTase | NAPRTase_N | NAPRTase_C |
| TC | ShaoY_2019_ERR3405884_bin.3_k141_7964 | ShaoY_2019_ERR3405884_bin.3_k141_7964_6 | 4804 | 6159 | - | 2.A.3.1.16 |
| TC | ShaoY_2019_ERR3405884_bin.3_k141_7964 | ShaoY_2019_ERR3405884_bin.3_k141_7964_7 | 6509 | 8152 | + | 2.A.66.2.14 |
Gene ID: ShaoY_2019_ERR3405884_bin.3_k141_7964_4
Type: CAZyme
Location: 1504 - 3150 (+)
Type: CAZyme
Location: 1504 - 3150 (+)
Gene ID: ShaoY_2019_ERR3405884_bin.3_k141_7964_5
Type: pfam
Location: 3184 - 4629 (+)
Type: pfam
Location: 3184 - 4629 (+)
Gene ID: ShaoY_2019_ERR3405884_bin.3_k141_7964_6
Type: TC
Location: 4804 - 6159 (-)
Type: TC
Location: 4804 - 6159 (-)
Gene ID: ShaoY_2019_ERR3405884_bin.3_k141_7964_7
Type: TC
Location: 6509 - 8152 (+)
Type: TC
Location: 6509 - 8152 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
CAMBIX01
Species
CAMBIX01 sp945867815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.