Cluster: ShaoY_2019_ERR3405884_bin.3_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405884_bin.3
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405884_bin.3_k141_4984 | ShaoY_2019_ERR3405884_bin.3_k141_4984_67 | 77042 | 78271 | + | 2.A.49.5.5 |
| CAZyme | ShaoY_2019_ERR3405884_bin.3_k141_4984 | ShaoY_2019_ERR3405884_bin.3_k141_4984_68 | 78347 | 79297 | + | GT2 |
| TC | ShaoY_2019_ERR3405884_bin.3_k141_4984 | ShaoY_2019_ERR3405884_bin.3_k141_4984_69 | 79335 | 80153 | + | 3.A.7.13.2 |
| TC | ShaoY_2019_ERR3405884_bin.3_k141_4984 | ShaoY_2019_ERR3405884_bin.3_k141_4984_70 | 80229 | 80969 | + | 3.A.1.15.11 |
| TC | ShaoY_2019_ERR3405884_bin.3_k141_4984 | ShaoY_2019_ERR3405884_bin.3_k141_4984_71 | 80969 | 81769 | + | 3.A.1.15.11 |
Gene ID: ShaoY_2019_ERR3405884_bin.3_k141_4984_67
Type: TC
Location: 77042 - 78271 (+)
Type: TC
Location: 77042 - 78271 (+)
Gene ID: ShaoY_2019_ERR3405884_bin.3_k141_4984_68
Type: CAZyme
Location: 78347 - 79297 (+)
Type: CAZyme
Location: 78347 - 79297 (+)
Gene ID: ShaoY_2019_ERR3405884_bin.3_k141_4984_69
Type: TC
Location: 79335 - 80153 (+)
Type: TC
Location: 79335 - 80153 (+)
Gene ID: ShaoY_2019_ERR3405884_bin.3_k141_4984_70
Type: TC
Location: 80229 - 80969 (+)
Type: TC
Location: 80229 - 80969 (+)
Gene ID: ShaoY_2019_ERR3405884_bin.3_k141_4984_71
Type: TC
Location: 80969 - 81769 (+)
Type: TC
Location: 80969 - 81769 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
CAMBIX01
Species
CAMBIX01 sp945867815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.