Cluster: ShaoY_2019_ERR3405884_bin.3_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405884_bin.3
- CGC Family ID: CGCFAM_00329
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405884_bin.3_k141_3232 | ShaoY_2019_ERR3405884_bin.3_k141_3232_3 | 2466 | 3947 | + | 2.A.21.2.1 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405884_bin.3_k141_3232 | ShaoY_2019_ERR3405884_bin.3_k141_3232_4 | 4168 | 4335 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405884_bin.3_k141_3232 | ShaoY_2019_ERR3405884_bin.3_k141_3232_5 | 4670 | 6556 | - | 3.A.1.120.6 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405884_bin.3_k141_3232 | ShaoY_2019_ERR3405884_bin.3_k141_3232_6 | 6912 | 7235 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ShaoY_2019_ERR3405884_bin.3_k141_3232 | ShaoY_2019_ERR3405884_bin.3_k141_3232_7 | 7274 | 8395 | - | GT28 |
| pfam | ShaoY_2019_ERR3405884_bin.3_k141_3232 | ShaoY_2019_ERR3405884_bin.3_k141_3232_8 | 8498 | 8776 | - | Bac_DNA_binding | HU-HIG |
| TC | ShaoY_2019_ERR3405884_bin.3_k141_3232 | ShaoY_2019_ERR3405884_bin.3_k141_3232_9 | 9051 | 10613 | - | 2.A.66.2.14 |
Gene ID: ShaoY_2019_ERR3405884_bin.3_k141_3232_3
Type: TC
Location: 2466 - 3947 (+)
Type: TC
Location: 2466 - 3947 (+)
Gene ID: ShaoY_2019_ERR3405884_bin.3_k141_3232_4
Type:
Location: 4168 - 4335 (-)
Type:
Location: 4168 - 4335 (-)
Gene ID: ShaoY_2019_ERR3405884_bin.3_k141_3232_5
Type: TC
Location: 4670 - 6556 (-)
Type: TC
Location: 4670 - 6556 (-)
Gene ID: ShaoY_2019_ERR3405884_bin.3_k141_3232_6
Type:
Location: 6912 - 7235 (+)
Type:
Location: 6912 - 7235 (+)
Gene ID: ShaoY_2019_ERR3405884_bin.3_k141_3232_7
Type: CAZyme
Location: 7274 - 8395 (-)
Type: CAZyme
Location: 7274 - 8395 (-)
Gene ID: ShaoY_2019_ERR3405884_bin.3_k141_3232_8
Type: pfam
Location: 8498 - 8776 (-)
Type: pfam
Location: 8498 - 8776 (-)
Gene ID: ShaoY_2019_ERR3405884_bin.3_k141_3232_9
Type: TC
Location: 9051 - 10613 (-)
Type: TC
Location: 9051 - 10613 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
CAMBIX01
Species
CAMBIX01 sp945867815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.