dbCAN Logo

Cluster: ShaoY_2019_ERR3405869_bin.2_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405869_bin.2_k141_2760 ShaoY_2019_ERR3405869_bin.2_k141_2760_73 61137 62204 + GH170
STP ShaoY_2019_ERR3405869_bin.2_k141_2760 ShaoY_2019_ERR3405869_bin.2_k141_2760_74 62197 63096 + SIS
TC ShaoY_2019_ERR3405869_bin.2_k141_2760 ShaoY_2019_ERR3405869_bin.2_k141_2760_75 63183 65138 + 4.A.1.2.11
TF ShaoY_2019_ERR3405869_bin.2_k141_2760 ShaoY_2019_ERR3405869_bin.2_k141_2760_76 65335 65967 + GntR
TC ShaoY_2019_ERR3405869_bin.2_k141_2760 ShaoY_2019_ERR3405869_bin.2_k141_2760_77 66230 67432 + 3.A.1.12.5
TC ShaoY_2019_ERR3405869_bin.2_k141_2760 ShaoY_2019_ERR3405869_bin.2_k141_2760_78 67422 69155 + 3.A.1.12.5
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_2760_73
Type: CAZyme
Location: 61137 - 62204 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_2760_74
Type: STP
Location: 62197 - 63096 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_2760_75
Type: TC
Location: 63183 - 65138 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_2760_76
Type: TF
Location: 65335 - 65967 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_2760_77
Type: TC
Location: 66230 - 67432 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_2760_78
Type: TC
Location: 67422 - 69155 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List