Cluster: ShaoY_2019_ERR3405869_bin.2_CGC38
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: ShaoY_2019_ERR3405869_bin.2
- CGC Family ID: CGCFAM_00037
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_452 | 463119 | 464765 | - | GH13_31 |
| CAZyme | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_453 | 464771 | 466528 | - | CBM34 | GH13_20 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_454 | 466897 | 468153 | + | 3.A.1.1.27 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_455 | 468355 | 469704 | + | 3.A.1.1.27 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_456 | 469708 | 470580 | + | 3.A.1.1.27 |
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_452
Type: CAZyme
Location: 463119 - 464765 (-)
Type: CAZyme
Location: 463119 - 464765 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_453
Type: CAZyme
Location: 464771 - 466528 (-)
Type: CAZyme
Location: 464771 - 466528 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_454
Type: TC
Location: 466897 - 468153 (+)
Type: TC
Location: 466897 - 468153 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_455
Type: TC
Location: 468355 - 469704 (+)
Type: TC
Location: 468355 - 469704 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_456
Type: TC
Location: 469708 - 470580 (+)
Type: TC
Location: 469708 - 470580 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C myersii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.