Cluster: ShaoY_2019_ERR3405869_bin.2_CGC34
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405869_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_277 | 276021 | 276806 | + | 3.A.1.8.1 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_278 | 276860 | 277519 | + | 3.A.1.8.2 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_279 | 277520 | 278155 | + | 3.A.1.19.2 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_280 | 278403 | 279389 | - | 2.A.16.6.2 |
| STP | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_281 | 279681 | 280913 | - | Pyr_redox_2 |
| STP | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_282 | 280913 | 281323 | - | Fer4 | Fer4 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_283 | 281327 | 283429 | - | 5.A.3.6.1 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_284 | 283900 | 284646 | - | 3.A.1.17.13 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_285 | 284646 | 285647 | - | 3.A.1.17.8 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_286 | 285644 | 286411 | - | 3.A.1.17.8 |
| pfam | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_287 | 286380 | 286676 | - | Thiamine_BP |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_288 | 287084 | 288442 | - | 2.A.2.3.3 |
| CAZyme | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_289 | 288470 | 290458 | - | GH78 |
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_277
Type: TC
Location: 276021 - 276806 (+)
Type: TC
Location: 276021 - 276806 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_278
Type: TC
Location: 276860 - 277519 (+)
Type: TC
Location: 276860 - 277519 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_279
Type: TC
Location: 277520 - 278155 (+)
Type: TC
Location: 277520 - 278155 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_280
Type: TC
Location: 278403 - 279389 (-)
Type: TC
Location: 278403 - 279389 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_281
Type: STP
Location: 279681 - 280913 (-)
Type: STP
Location: 279681 - 280913 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_282
Type: STP
Location: 280913 - 281323 (-)
Type: STP
Location: 280913 - 281323 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_283
Type: TC
Location: 281327 - 283429 (-)
Type: TC
Location: 281327 - 283429 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_284
Type: TC
Location: 283900 - 284646 (-)
Type: TC
Location: 283900 - 284646 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_285
Type: TC
Location: 284646 - 285647 (-)
Type: TC
Location: 284646 - 285647 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_286
Type: TC
Location: 285644 - 286411 (-)
Type: TC
Location: 285644 - 286411 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_287
Type: pfam
Location: 286380 - 286676 (-)
Type: pfam
Location: 286380 - 286676 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_288
Type: TC
Location: 287084 - 288442 (-)
Type: TC
Location: 287084 - 288442 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_289
Type: CAZyme
Location: 288470 - 290458 (-)
Type: CAZyme
Location: 288470 - 290458 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C myersii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.