Cluster: ShaoY_2019_ERR3405869_bin.2_CGC33
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405869_bin.2
- CGC Family ID: CGCFAM_06540
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_240 | 243790 | 245100 | + | GT2 |
| CAZyme | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_241 | 245134 | 246258 | + | GH8 |
| pfam | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_242 | 246435 | 247133 | - | DUF697 |
| STP | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_243 | 247267 | 247839 | - | TetR_N |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_244 | 247991 | 248692 | + | 3.A.1.122.14 |
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_240
Type: CAZyme
Location: 243790 - 245100 (+)
Type: CAZyme
Location: 243790 - 245100 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_241
Type: CAZyme
Location: 245134 - 246258 (+)
Type: CAZyme
Location: 245134 - 246258 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_242
Type: pfam
Location: 246435 - 247133 (-)
Type: pfam
Location: 246435 - 247133 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_243
Type: STP
Location: 247267 - 247839 (-)
Type: STP
Location: 247267 - 247839 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_244
Type: TC
Location: 247991 - 248692 (+)
Type: TC
Location: 247991 - 248692 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C myersii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.