Cluster: ShaoY_2019_ERR3405869_bin.2_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405869_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_56 | 60389 | 61513 | - | GH172 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_57 | 61518 | 61913 | - | 4.A.6.1.19 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_58 | 61932 | 62744 | - | 4.A.6.1.13 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_59 | 62746 | 63531 | - | 4.A.6.1.13 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_8088 | ShaoY_2019_ERR3405869_bin.2_k141_8088_60 | 63554 | 64027 | - | 4.A.6.1.3 |
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_56
Type: CAZyme
Location: 60389 - 61513 (-)
Type: CAZyme
Location: 60389 - 61513 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_57
Type: TC
Location: 61518 - 61913 (-)
Type: TC
Location: 61518 - 61913 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_58
Type: TC
Location: 61932 - 62744 (-)
Type: TC
Location: 61932 - 62744 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_59
Type: TC
Location: 62746 - 63531 (-)
Type: TC
Location: 62746 - 63531 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_8088_60
Type: TC
Location: 63554 - 64027 (-)
Type: TC
Location: 63554 - 64027 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C myersii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.