Cluster: ShaoY_2019_ERR3405869_bin.2_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405869_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405869_bin.2_k141_7961 | ShaoY_2019_ERR3405869_bin.2_k141_7961_251 | 292357 | 292980 | + | 2.A.88.5.2 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_7961 | ShaoY_2019_ERR3405869_bin.2_k141_7961_252 | 293572 | 294099 | + | 3.A.1.26.10 |
| CAZyme | ShaoY_2019_ERR3405869_bin.2_k141_7961 | ShaoY_2019_ERR3405869_bin.2_k141_7961_253 | 294380 | 295552 | + | GH3 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_7961 | ShaoY_2019_ERR3405869_bin.2_k141_7961_254 | 295606 | 297363 | - | 3.A.1.135.5 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_7961 | ShaoY_2019_ERR3405869_bin.2_k141_7961_255 | 297353 | 299107 | - | 3.A.1.135.5 |
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7961_251
Type: TC
Location: 292357 - 292980 (+)
Type: TC
Location: 292357 - 292980 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7961_252
Type: TC
Location: 293572 - 294099 (+)
Type: TC
Location: 293572 - 294099 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7961_253
Type: CAZyme
Location: 294380 - 295552 (+)
Type: CAZyme
Location: 294380 - 295552 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7961_254
Type: TC
Location: 295606 - 297363 (-)
Type: TC
Location: 295606 - 297363 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7961_255
Type: TC
Location: 297353 - 299107 (-)
Type: TC
Location: 297353 - 299107 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C myersii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.