Cluster: ShaoY_2019_ERR3405869_bin.2_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405869_bin.2
- CGC Family ID: CGCFAM_00979
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405869_bin.2_k141_7961 | ShaoY_2019_ERR3405869_bin.2_k141_7961_8 | 7616 | 9415 | + | CBM50 | GH73 |
| pfam | ShaoY_2019_ERR3405869_bin.2_k141_7961 | ShaoY_2019_ERR3405869_bin.2_k141_7961_9 | 9743 | 12154 | + | tRNA-synt_1 | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | tRNA-synt_1_2 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_7961 | ShaoY_2019_ERR3405869_bin.2_k141_7961_10 | 12578 | 13351 | + | 3.A.1.11.8 |
| pfam | ShaoY_2019_ERR3405869_bin.2_k141_7961 | ShaoY_2019_ERR3405869_bin.2_k141_7961_11 | 13348 | 15042 | + | BPD_transp_1 | BPD_transp_1 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_7961 | ShaoY_2019_ERR3405869_bin.2_k141_7961_12 | 15146 | 16141 | + | 3.A.1.20.2 |
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7961_8
Type: CAZyme
Location: 7616 - 9415 (+)
Type: CAZyme
Location: 7616 - 9415 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7961_9
Type: pfam
Location: 9743 - 12154 (+)
Type: pfam
Location: 9743 - 12154 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7961_10
Type: TC
Location: 12578 - 13351 (+)
Type: TC
Location: 12578 - 13351 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7961_11
Type: pfam
Location: 13348 - 15042 (+)
Type: pfam
Location: 13348 - 15042 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7961_12
Type: TC
Location: 15146 - 16141 (+)
Type: TC
Location: 15146 - 16141 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C myersii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.