Cluster: ShaoY_2019_ERR3405869_bin.2_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405869_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405869_bin.2_k141_7665 | ShaoY_2019_ERR3405869_bin.2_k141_7665_123 | 145810 | 146748 | - | 3.A.1.12.8 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_7665 | ShaoY_2019_ERR3405869_bin.2_k141_7665_124 | 146745 | 148277 | - | 3.A.1.12.8 |
| pfam | ShaoY_2019_ERR3405869_bin.2_k141_7665 | ShaoY_2019_ERR3405869_bin.2_k141_7665_125 | 148958 | 149830 | - | ROK |
| CAZyme | ShaoY_2019_ERR3405869_bin.2_k141_7665 | ShaoY_2019_ERR3405869_bin.2_k141_7665_126 | 149844 | 151280 | - | GH32 |
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7665_123
Type: TC
Location: 145810 - 146748 (-)
Type: TC
Location: 145810 - 146748 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7665_124
Type: TC
Location: 146745 - 148277 (-)
Type: TC
Location: 146745 - 148277 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7665_125
Type: pfam
Location: 148958 - 149830 (-)
Type: pfam
Location: 148958 - 149830 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7665_126
Type: CAZyme
Location: 149844 - 151280 (-)
Type: CAZyme
Location: 149844 - 151280 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C myersii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.