Cluster: ShaoY_2019_ERR3405869_bin.2_CGC23
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405869_bin.2
- CGC Family ID: CGCFAM_04321
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405869_bin.2_k141_7665 | ShaoY_2019_ERR3405869_bin.2_k141_7665_106 | 126016 | 126837 | - | 2.A.5.5.2 |
| pfam | ShaoY_2019_ERR3405869_bin.2_k141_7665 | ShaoY_2019_ERR3405869_bin.2_k141_7665_107 | 126925 | 127443 | - | DUF308 | DUF308 | DUF308 |
| CAZyme | ShaoY_2019_ERR3405869_bin.2_k141_7665 | ShaoY_2019_ERR3405869_bin.2_k141_7665_108 | 127618 | 128949 | - | GH32 |
| pfam | ShaoY_2019_ERR3405869_bin.2_k141_7665 | ShaoY_2019_ERR3405869_bin.2_k141_7665_109 | 129063 | 129479 | - | EIIA-man |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_7665 | ShaoY_2019_ERR3405869_bin.2_k141_7665_110 | 129491 | 129967 | - | 4.A.6.1.18 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_7665 | ShaoY_2019_ERR3405869_bin.2_k141_7665_111 | 129986 | 130810 | - | 4.A.6.1.13 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_7665 | ShaoY_2019_ERR3405869_bin.2_k141_7665_112 | 130773 | 131549 | - | 4.A.6.1.13 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_7665 | ShaoY_2019_ERR3405869_bin.2_k141_7665_113 | 131702 | 134197 | - | 3.A.23.1.1 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_7665 | ShaoY_2019_ERR3405869_bin.2_k141_7665_114 | 134610 | 136232 | + | 3.A.1.121.4 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_7665 | ShaoY_2019_ERR3405869_bin.2_k141_7665_115 | 136307 | 137839 | - | 3.A.1.15.3 |
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7665_106
Type: TC
Location: 126016 - 126837 (-)
Type: TC
Location: 126016 - 126837 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7665_107
Type: pfam
Location: 126925 - 127443 (-)
Type: pfam
Location: 126925 - 127443 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7665_108
Type: CAZyme
Location: 127618 - 128949 (-)
Type: CAZyme
Location: 127618 - 128949 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7665_109
Type: pfam
Location: 129063 - 129479 (-)
Type: pfam
Location: 129063 - 129479 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7665_110
Type: TC
Location: 129491 - 129967 (-)
Type: TC
Location: 129491 - 129967 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7665_111
Type: TC
Location: 129986 - 130810 (-)
Type: TC
Location: 129986 - 130810 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7665_112
Type: TC
Location: 130773 - 131549 (-)
Type: TC
Location: 130773 - 131549 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7665_113
Type: TC
Location: 131702 - 134197 (-)
Type: TC
Location: 131702 - 134197 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7665_114
Type: TC
Location: 134610 - 136232 (+)
Type: TC
Location: 134610 - 136232 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7665_115
Type: TC
Location: 136307 - 137839 (-)
Type: TC
Location: 136307 - 137839 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C myersii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.