Cluster: ShaoY_2019_ERR3405869_bin.2_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405869_bin.2
- CGC Family ID: CGCFAM_10803
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405869_bin.2_k141_7665 | ShaoY_2019_ERR3405869_bin.2_k141_7665_28 | 33111 | 34475 | - | 4.A.5.1.4 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_7665 | ShaoY_2019_ERR3405869_bin.2_k141_7665_29 | 34503 | 34784 | - | 4.A.5.1.3 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_7665 | ShaoY_2019_ERR3405869_bin.2_k141_7665_30 | 34809 | 35267 | - | 4.A.5.1.6 |
| pfam | ShaoY_2019_ERR3405869_bin.2_k141_7665 | ShaoY_2019_ERR3405869_bin.2_k141_7665_31 | 35302 | 35922 | - | Aldolase |
| pfam | ShaoY_2019_ERR3405869_bin.2_k141_7665 | ShaoY_2019_ERR3405869_bin.2_k141_7665_32 | 35946 | 37985 | - | PTS_EIIA_2 | PRD |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_7665 | ShaoY_2019_ERR3405869_bin.2_k141_7665_33 | 38236 | 40239 | - | 4.A.1.2.13 |
| CAZyme | ShaoY_2019_ERR3405869_bin.2_k141_7665 | ShaoY_2019_ERR3405869_bin.2_k141_7665_34 | 40545 | 43172 | + | GH65 |
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7665_28
Type: TC
Location: 33111 - 34475 (-)
Type: TC
Location: 33111 - 34475 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7665_29
Type: TC
Location: 34503 - 34784 (-)
Type: TC
Location: 34503 - 34784 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7665_30
Type: TC
Location: 34809 - 35267 (-)
Type: TC
Location: 34809 - 35267 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7665_31
Type: pfam
Location: 35302 - 35922 (-)
Type: pfam
Location: 35302 - 35922 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7665_32
Type: pfam
Location: 35946 - 37985 (-)
Type: pfam
Location: 35946 - 37985 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7665_33
Type: TC
Location: 38236 - 40239 (-)
Type: TC
Location: 38236 - 40239 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7665_34
Type: CAZyme
Location: 40545 - 43172 (+)
Type: CAZyme
Location: 40545 - 43172 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C myersii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.