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Cluster: ShaoY_2019_ERR3405869_bin.2_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405869_bin.2_k141_2161 ShaoY_2019_ERR3405869_bin.2_k141_2161_174 194436 195527 - GH170
TC ShaoY_2019_ERR3405869_bin.2_k141_2161 ShaoY_2019_ERR3405869_bin.2_k141_2161_175 195703 196443 + 3.D.1.8.1
pfam ShaoY_2019_ERR3405869_bin.2_k141_2161 ShaoY_2019_ERR3405869_bin.2_k141_2161_176 196507 196941 - FabA
pfam ShaoY_2019_ERR3405869_bin.2_k141_2161 ShaoY_2019_ERR3405869_bin.2_k141_2161_177 197152 197907 + adh_short | KR | adh_short_C2
TC ShaoY_2019_ERR3405869_bin.2_k141_2161 ShaoY_2019_ERR3405869_bin.2_k141_2161_178 198259 199980 + 2.A.58.2.2
TC ShaoY_2019_ERR3405869_bin.2_k141_2161 ShaoY_2019_ERR3405869_bin.2_k141_2161_179 200129 201046 + 1.A.23.3.1
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_2161_174
Type: CAZyme
Location: 194436 - 195527 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_2161_175
Type: TC
Location: 195703 - 196443 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_2161_176
Type: pfam
Location: 196507 - 196941 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_2161_177
Type: pfam
Location: 197152 - 197907 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_2161_178
Type: TC
Location: 198259 - 199980 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_2161_179
Type: TC
Location: 200129 - 201046 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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