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Cluster: ShaoY_2019_ERR3405869_bin.2_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405869_bin.2_k141_7631 ShaoY_2019_ERR3405869_bin.2_k141_7631_6 5412 6143 + 9.B.116.1.1
STP ShaoY_2019_ERR3405869_bin.2_k141_7631 ShaoY_2019_ERR3405869_bin.2_k141_7631_7 6140 7198 + HATPase_c
TF ShaoY_2019_ERR3405869_bin.2_k141_7631 ShaoY_2019_ERR3405869_bin.2_k141_7631_8 7239 7868 + GerE
TC ShaoY_2019_ERR3405869_bin.2_k141_7631 ShaoY_2019_ERR3405869_bin.2_k141_7631_9 7971 8636 + 2.A.38.4.4
NULL(UNKNOWN) ShaoY_2019_ERR3405869_bin.2_k141_7631 ShaoY_2019_ERR3405869_bin.2_k141_7631_10 8649 8942 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme ShaoY_2019_ERR3405869_bin.2_k141_7631 ShaoY_2019_ERR3405869_bin.2_k141_7631_11 8965 9900 + GT2
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7631_6
Type: TC
Location: 5412 - 6143 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7631_7
Type: STP
Location: 6140 - 7198 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7631_8
Type: TF
Location: 7239 - 7868 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7631_9
Type: TC
Location: 7971 - 8636 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7631_10
Type:
Location: 8649 - 8942 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7631_11
Type: CAZyme
Location: 8965 - 9900 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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