Cluster: ShaoY_2019_ERR3405869_bin.2_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405869_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405869_bin.2_k141_5894 | ShaoY_2019_ERR3405869_bin.2_k141_5894_278 | 290606 | 292000 | + | 3.B.1.1.6 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_5894 | ShaoY_2019_ERR3405869_bin.2_k141_5894_279 | 292297 | 293673 | + | 3.A.1.1.20 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_5894 | ShaoY_2019_ERR3405869_bin.2_k141_5894_280 | 293721 | 294635 | + | 3.A.1.1.25 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_5894 | ShaoY_2019_ERR3405869_bin.2_k141_5894_281 | 294645 | 295475 | + | 3.A.1.1.41 |
| CAZyme | ShaoY_2019_ERR3405869_bin.2_k141_5894 | ShaoY_2019_ERR3405869_bin.2_k141_5894_282 | 295472 | 298552 | + | GH38 |
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_5894_278
Type: TC
Location: 290606 - 292000 (+)
Type: TC
Location: 290606 - 292000 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_5894_279
Type: TC
Location: 292297 - 293673 (+)
Type: TC
Location: 292297 - 293673 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_5894_280
Type: TC
Location: 293721 - 294635 (+)
Type: TC
Location: 293721 - 294635 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_5894_281
Type: TC
Location: 294645 - 295475 (+)
Type: TC
Location: 294645 - 295475 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_5894_282
Type: CAZyme
Location: 295472 - 298552 (+)
Type: CAZyme
Location: 295472 - 298552 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C myersii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.