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Cluster: ShaoY_2019_ERR3405869_bin.2_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405869_bin.2_k141_5827 ShaoY_2019_ERR3405869_bin.2_k141_5827_80 90063 90899 + 3.A.1.1.39
CAZyme ShaoY_2019_ERR3405869_bin.2_k141_5827 ShaoY_2019_ERR3405869_bin.2_k141_5827_81 90912 92420 + GH13_23
CAZyme ShaoY_2019_ERR3405869_bin.2_k141_5827 ShaoY_2019_ERR3405869_bin.2_k141_5827_82 92421 93320 + GT108
CAZyme ShaoY_2019_ERR3405869_bin.2_k141_5827 ShaoY_2019_ERR3405869_bin.2_k141_5827_83 93331 94392 + GH130_4
pfam ShaoY_2019_ERR3405869_bin.2_k141_5827 ShaoY_2019_ERR3405869_bin.2_k141_5827_84 94398 96119 + PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme ShaoY_2019_ERR3405869_bin.2_k141_5827 ShaoY_2019_ERR3405869_bin.2_k141_5827_85 96130 97095 + GT108
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_5827_80
Type: TC
Location: 90063 - 90899 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_5827_81
Type: CAZyme
Location: 90912 - 92420 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_5827_82
Type: CAZyme
Location: 92421 - 93320 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_5827_83
Type: CAZyme
Location: 93331 - 94392 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_5827_84
Type: pfam
Location: 94398 - 96119 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_5827_85
Type: CAZyme
Location: 96130 - 97095 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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