Cluster: ShaoY_2019_ERR3405869_bin.2_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405869_bin.2
- CGC Family ID: CGCFAM_00255
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405869_bin.2_k141_3897 | ShaoY_2019_ERR3405869_bin.2_k141_3897_95 | 93632 | 94864 | - | GT4 |
| pfam | ShaoY_2019_ERR3405869_bin.2_k141_3897 | ShaoY_2019_ERR3405869_bin.2_k141_3897_96 | 95040 | 95453 | - | MgtC |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_3897 | ShaoY_2019_ERR3405869_bin.2_k141_3897_97 | 95683 | 97410 | - | 8.A.7.1.1 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_3897 | ShaoY_2019_ERR3405869_bin.2_k141_3897_98 | 97410 | 97676 | - | 8.A.8.1.1 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_3897 | ShaoY_2019_ERR3405869_bin.2_k141_3897_99 | 98101 | 100380 | + | 3.A.9.1.2 |
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_3897_95
Type: CAZyme
Location: 93632 - 94864 (-)
Type: CAZyme
Location: 93632 - 94864 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_3897_96
Type: pfam
Location: 95040 - 95453 (-)
Type: pfam
Location: 95040 - 95453 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_3897_97
Type: TC
Location: 95683 - 97410 (-)
Type: TC
Location: 95683 - 97410 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_3897_98
Type: TC
Location: 97410 - 97676 (-)
Type: TC
Location: 97410 - 97676 (-)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_3897_99
Type: TC
Location: 98101 - 100380 (+)
Type: TC
Location: 98101 - 100380 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C myersii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.