dbCAN HGM

Cluster: ShaoY_2019_ERR3405861_bin.6_CGC8

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	ShaoY_2019_ERR3405861_bin.6_k141_12010	ShaoY_2019_ERR3405861_bin.6_k141_12010_4	3010	3939	+	3.A.1.132.3
pfam	ShaoY_2019_ERR3405861_bin.6_k141_12010	ShaoY_2019_ERR3405861_bin.6_k141_12010_5	3941	5206	+	HI0933_like
pfam	ShaoY_2019_ERR3405861_bin.6_k141_12010	ShaoY_2019_ERR3405861_bin.6_k141_12010_6	5269	6987	+	NAD_binding_8 \| FAD-depend_C
TC	ShaoY_2019_ERR3405861_bin.6_k141_12010	ShaoY_2019_ERR3405861_bin.6_k141_12010_7	7099	7380	+	4.A.5.1.6
pfam	ShaoY_2019_ERR3405861_bin.6_k141_12010	ShaoY_2019_ERR3405861_bin.6_k141_12010_8	7389	9629	-	Helicase_C \| UVR \| ResIII \| UvrB \| UvrB_inter
CAZyme	ShaoY_2019_ERR3405861_bin.6_k141_12010	ShaoY_2019_ERR3405861_bin.6_k141_12010_9	9643	10743	-	GH23

Gene ID: ShaoY_2019_ERR3405861_bin.6_k141_12010_4
Type: TC
Location: 3010 - 3939 (+)

Gene ID: ShaoY_2019_ERR3405861_bin.6_k141_12010_5
Type: pfam
Location: 3941 - 5206 (+)

Gene ID: ShaoY_2019_ERR3405861_bin.6_k141_12010_6
Type: pfam
Location: 5269 - 6987 (+)

Gene ID: ShaoY_2019_ERR3405861_bin.6_k141_12010_7
Type: TC
Location: 7099 - 7380 (+)

Gene ID: ShaoY_2019_ERR3405861_bin.6_k141_12010_8
Type: pfam
Location: 7389 - 9629 (-)

Gene ID: ShaoY_2019_ERR3405861_bin.6_k141_12010_9
Type: CAZyme
Location: 9643 - 10743 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.