Cluster: ShaoY_2019_ERR3405861_bin.6_CGC14

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	ShaoY_2019_ERR3405861_bin.6_k141_20954	ShaoY_2019_ERR3405861_bin.6_k141_20954_4	4381	6309	+	4.A.1.2.1
CAZyme	ShaoY_2019_ERR3405861_bin.6_k141_20954	ShaoY_2019_ERR3405861_bin.6_k141_20954_5	6405	7916	+	GH32
pfam	ShaoY_2019_ERR3405861_bin.6_k141_20954	ShaoY_2019_ERR3405861_bin.6_k141_20954_6	8021	8920	+	ROK
TF	ShaoY_2019_ERR3405861_bin.6_k141_20954	ShaoY_2019_ERR3405861_bin.6_k141_20954_7	9027	9770	-	GntR
CAZyme	ShaoY_2019_ERR3405861_bin.6_k141_20954	ShaoY_2019_ERR3405861_bin.6_k141_20954_8	10001	11404	+	GH1
TC	ShaoY_2019_ERR3405861_bin.6_k141_20954	ShaoY_2019_ERR3405861_bin.6_k141_20954_9	11585	12934	+	4.A.3.2.9
TC	ShaoY_2019_ERR3405861_bin.6_k141_20954	ShaoY_2019_ERR3405861_bin.6_k141_20954_10	13061	13354	+	4.A.3.2.9

Gene ID: ShaoY_2019_ERR3405861_bin.6_k141_20954_4
Type: TC
Location: 4381 - 6309 (+)

Gene ID: ShaoY_2019_ERR3405861_bin.6_k141_20954_5
Type: CAZyme
Location: 6405 - 7916 (+)

Gene ID: ShaoY_2019_ERR3405861_bin.6_k141_20954_6
Type: pfam
Location: 8021 - 8920 (+)

Gene ID: ShaoY_2019_ERR3405861_bin.6_k141_20954_7
Type: TF
Location: 9027 - 9770 (-)

Gene ID: ShaoY_2019_ERR3405861_bin.6_k141_20954_8
Type: CAZyme
Location: 10001 - 11404 (+)

Gene ID: ShaoY_2019_ERR3405861_bin.6_k141_20954_9
Type: TC
Location: 11585 - 12934 (+)

Gene ID: ShaoY_2019_ERR3405861_bin.6_k141_20954_10
Type: TC
Location: 13061 - 13354 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.