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Cluster: ShaoY_2019_ERR3405861_bin.6_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405861_bin.6_k141_331 ShaoY_2019_ERR3405861_bin.6_k141_331_13 10594 12024 - 4.A.3.2.4
TC ShaoY_2019_ERR3405861_bin.6_k141_331 ShaoY_2019_ERR3405861_bin.6_k141_331_14 12050 12349 - 4.A.3.2.8
CAZyme ShaoY_2019_ERR3405861_bin.6_k141_331 ShaoY_2019_ERR3405861_bin.6_k141_331_15 12444 13775 - GH4
CAZyme ShaoY_2019_ERR3405861_bin.6_k141_331 ShaoY_2019_ERR3405861_bin.6_k141_331_16 13778 14863 - GH170
pfam ShaoY_2019_ERR3405861_bin.6_k141_331 ShaoY_2019_ERR3405861_bin.6_k141_331_17 15344 15826 - RNase_H
TC ShaoY_2019_ERR3405861_bin.6_k141_331 ShaoY_2019_ERR3405861_bin.6_k141_331_18 15823 17643 - 3.A.1.210.9
Gene ID: ShaoY_2019_ERR3405861_bin.6_k141_331_13
Type: TC
Location: 10594 - 12024 (-)
Gene ID: ShaoY_2019_ERR3405861_bin.6_k141_331_14
Type: TC
Location: 12050 - 12349 (-)
Gene ID: ShaoY_2019_ERR3405861_bin.6_k141_331_15
Type: CAZyme
Location: 12444 - 13775 (-)
Gene ID: ShaoY_2019_ERR3405861_bin.6_k141_331_16
Type: CAZyme
Location: 13778 - 14863 (-)
Gene ID: ShaoY_2019_ERR3405861_bin.6_k141_331_17
Type: pfam
Location: 15344 - 15826 (-)
Gene ID: ShaoY_2019_ERR3405861_bin.6_k141_331_18
Type: TC
Location: 15823 - 17643 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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