Cluster: ShaoY_2019_ERR3405857_bin.6_CGC24
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405857_bin.6
- CGC Family ID: CGCFAM_01125
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405857_bin.6_k141_33488 | ShaoY_2019_ERR3405857_bin.6_k141_33488_173 | 236702 | 237364 | + | 8.A.3.2.3 |
| TC | ShaoY_2019_ERR3405857_bin.6_k141_33488 | ShaoY_2019_ERR3405857_bin.6_k141_33488_174 | 237366 | 238265 | + | 8.A.3.1.2 |
| pfam | ShaoY_2019_ERR3405857_bin.6_k141_33488 | ShaoY_2019_ERR3405857_bin.6_k141_33488_175 | 238327 | 238989 | + | CpsB_CapC |
| pfam | ShaoY_2019_ERR3405857_bin.6_k141_33488 | ShaoY_2019_ERR3405857_bin.6_k141_33488_176 | 239246 | 239761 | + | KOW | NusG |
| TC | ShaoY_2019_ERR3405857_bin.6_k141_33488 | ShaoY_2019_ERR3405857_bin.6_k141_33488_177 | 239742 | 240557 | + | 9.B.18.1.3 |
| CAZyme | ShaoY_2019_ERR3405857_bin.6_k141_33488 | ShaoY_2019_ERR3405857_bin.6_k141_33488_178 | 240554 | 241777 | + | GT4 |
| TC | ShaoY_2019_ERR3405857_bin.6_k141_33488 | ShaoY_2019_ERR3405857_bin.6_k141_33488_179 | 241767 | 242822 | + | 9.B.18.2.1 |
| pfam | ShaoY_2019_ERR3405857_bin.6_k141_33488 | ShaoY_2019_ERR3405857_bin.6_k141_33488_180 | 242822 | 244012 | + | Epimerase | Polysacc_synt_C |
| CAZyme | ShaoY_2019_ERR3405857_bin.6_k141_33488 | ShaoY_2019_ERR3405857_bin.6_k141_33488_181 | 244014 | 245123 | + | GT4 |
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_33488_173
Type: TC
Location: 236702 - 237364 (+)
Type: TC
Location: 236702 - 237364 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_33488_174
Type: TC
Location: 237366 - 238265 (+)
Type: TC
Location: 237366 - 238265 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_33488_175
Type: pfam
Location: 238327 - 238989 (+)
Type: pfam
Location: 238327 - 238989 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_33488_176
Type: pfam
Location: 239246 - 239761 (+)
Type: pfam
Location: 239246 - 239761 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_33488_177
Type: TC
Location: 239742 - 240557 (+)
Type: TC
Location: 239742 - 240557 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_33488_178
Type: CAZyme
Location: 240554 - 241777 (+)
Type: CAZyme
Location: 240554 - 241777 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_33488_179
Type: TC
Location: 241767 - 242822 (+)
Type: TC
Location: 241767 - 242822 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_33488_180
Type: pfam
Location: 242822 - 244012 (+)
Type: pfam
Location: 242822 - 244012 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_33488_181
Type: CAZyme
Location: 244014 - 245123 (+)
Type: CAZyme
Location: 244014 - 245123 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Thermophilibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| ShaoY_2019_ERR3405857_bin.6_k141_33488_179 | vegan > omnivore | 1.15437 | 0.02695 |