Cluster: ShaoY_2019_ERR3405857_bin.6_CGC21
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: ShaoY_2019_ERR3405857_bin.6
- CGC Family ID: CGCFAM_09846
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405857_bin.6_k141_33488 | ShaoY_2019_ERR3405857_bin.6_k141_33488_38 | 40668 | 41510 | - | 4.A.6.1.19 |
| TC | ShaoY_2019_ERR3405857_bin.6_k141_33488 | ShaoY_2019_ERR3405857_bin.6_k141_33488_39 | 41510 | 42307 | - | 4.A.6.1.19 |
| TC | ShaoY_2019_ERR3405857_bin.6_k141_33488 | ShaoY_2019_ERR3405857_bin.6_k141_33488_40 | 42425 | 42910 | - | 4.A.6.1.19 |
| pfam | ShaoY_2019_ERR3405857_bin.6_k141_33488 | ShaoY_2019_ERR3405857_bin.6_k141_33488_41 | 42958 | 43419 | - | EIIA-man |
| pfam | ShaoY_2019_ERR3405857_bin.6_k141_33488 | ShaoY_2019_ERR3405857_bin.6_k141_33488_42 | 43713 | 47144 | - | DEAD | Helicase_C | CarD_TRCF_RID | TRCF | ResIII | UvrB_inter |
| CAZyme | ShaoY_2019_ERR3405857_bin.6_k141_33488 | ShaoY_2019_ERR3405857_bin.6_k141_33488_43 | 47340 | 50597 | - | GH13_39 | GH77 |
| CAZyme | ShaoY_2019_ERR3405857_bin.6_k141_33488 | ShaoY_2019_ERR3405857_bin.6_k141_33488_44 | 50600 | 52099 | - | GT5 |
| pfam | ShaoY_2019_ERR3405857_bin.6_k141_33488 | ShaoY_2019_ERR3405857_bin.6_k141_33488_45 | 52116 | 53210 | - | NTP_transferase | Hexapep_GlmU |
| pfam | ShaoY_2019_ERR3405857_bin.6_k141_33488 | ShaoY_2019_ERR3405857_bin.6_k141_33488_46 | 53213 | 54361 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | ShaoY_2019_ERR3405857_bin.6_k141_33488 | ShaoY_2019_ERR3405857_bin.6_k141_33488_47 | 54436 | 56868 | - | GT35 |
| CAZyme | ShaoY_2019_ERR3405857_bin.6_k141_33488 | ShaoY_2019_ERR3405857_bin.6_k141_33488_48 | 56980 | 59145 | - | CBM48 | GH13_9 |
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_33488_38
Type: TC
Location: 40668 - 41510 (-)
Type: TC
Location: 40668 - 41510 (-)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_33488_39
Type: TC
Location: 41510 - 42307 (-)
Type: TC
Location: 41510 - 42307 (-)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_33488_40
Type: TC
Location: 42425 - 42910 (-)
Type: TC
Location: 42425 - 42910 (-)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_33488_41
Type: pfam
Location: 42958 - 43419 (-)
Type: pfam
Location: 42958 - 43419 (-)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_33488_42
Type: pfam
Location: 43713 - 47144 (-)
Type: pfam
Location: 43713 - 47144 (-)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_33488_43
Type: CAZyme
Location: 47340 - 50597 (-)
Type: CAZyme
Location: 47340 - 50597 (-)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_33488_44
Type: CAZyme
Location: 50600 - 52099 (-)
Type: CAZyme
Location: 50600 - 52099 (-)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_33488_45
Type: pfam
Location: 52116 - 53210 (-)
Type: pfam
Location: 52116 - 53210 (-)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_33488_46
Type: pfam
Location: 53213 - 54361 (-)
Type: pfam
Location: 53213 - 54361 (-)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_33488_47
Type: CAZyme
Location: 54436 - 56868 (-)
Type: CAZyme
Location: 54436 - 56868 (-)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_33488_48
Type: CAZyme
Location: 56980 - 59145 (-)
Type: CAZyme
Location: 56980 - 59145 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Thermophilibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| ShaoY_2019_ERR3405857_bin.6_k141_33488_45 | vegetarian > vegan | 1.18005 | 0.02258 |