Cluster: ShaoY_2019_ERR3405857_bin.6_CGC19
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: ShaoY_2019_ERR3405857_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405857_bin.6_k141_32218 | ShaoY_2019_ERR3405857_bin.6_k141_32218_173 | 187110 | 188225 | + | 3.A.1.1.26 |
| TC | ShaoY_2019_ERR3405857_bin.6_k141_32218 | ShaoY_2019_ERR3405857_bin.6_k141_32218_174 | 188244 | 189533 | + | 3.A.1.1.28 |
| TC | ShaoY_2019_ERR3405857_bin.6_k141_32218 | ShaoY_2019_ERR3405857_bin.6_k141_32218_175 | 189546 | 190415 | + | 3.A.1.1.28 |
| TC | ShaoY_2019_ERR3405857_bin.6_k141_32218 | ShaoY_2019_ERR3405857_bin.6_k141_32218_176 | 190415 | 191272 | + | 3.A.1.1.28 |
| CAZyme | ShaoY_2019_ERR3405857_bin.6_k141_32218 | ShaoY_2019_ERR3405857_bin.6_k141_32218_177 | 191411 | 193600 | + | GH36 |
| CAZyme | ShaoY_2019_ERR3405857_bin.6_k141_32218 | ShaoY_2019_ERR3405857_bin.6_k141_32218_178 | 193713 | 195404 | - | GH13_30 |
| CAZyme | ShaoY_2019_ERR3405857_bin.6_k141_32218 | ShaoY_2019_ERR3405857_bin.6_k141_32218_179 | 195491 | 197755 | - | GT35 |
| CAZyme | ShaoY_2019_ERR3405857_bin.6_k141_32218 | ShaoY_2019_ERR3405857_bin.6_k141_32218_180 | 197757 | 199277 | - | GH77 |
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_32218_173
Type: TC
Location: 187110 - 188225 (+)
Type: TC
Location: 187110 - 188225 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_32218_174
Type: TC
Location: 188244 - 189533 (+)
Type: TC
Location: 188244 - 189533 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_32218_175
Type: TC
Location: 189546 - 190415 (+)
Type: TC
Location: 189546 - 190415 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_32218_176
Type: TC
Location: 190415 - 191272 (+)
Type: TC
Location: 190415 - 191272 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_32218_177
Type: CAZyme
Location: 191411 - 193600 (+)
Type: CAZyme
Location: 191411 - 193600 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_32218_178
Type: CAZyme
Location: 193713 - 195404 (-)
Type: CAZyme
Location: 193713 - 195404 (-)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_32218_179
Type: CAZyme
Location: 195491 - 197755 (-)
Type: CAZyme
Location: 195491 - 197755 (-)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_32218_180
Type: CAZyme
Location: 197757 - 199277 (-)
Type: CAZyme
Location: 197757 - 199277 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Thermophilibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| ShaoY_2019_ERR3405857_bin.6_k141_32218_178 | vegan > omnivore | 1.94712 | 0.02695 |