Cluster: ShaoY_2019_ERR3405857_bin.6_CGC16
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405857_bin.6
- CGC Family ID: CGCFAM_02881
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405857_bin.6_k141_32218 | ShaoY_2019_ERR3405857_bin.6_k141_32218_140 | 146128 | 147651 | + | GH13_5 |
| peptidase | ShaoY_2019_ERR3405857_bin.6_k141_32218 | ShaoY_2019_ERR3405857_bin.6_k141_32218_141 | 147742 | 149160 | - | M20.UPA |
| TC | ShaoY_2019_ERR3405857_bin.6_k141_32218 | ShaoY_2019_ERR3405857_bin.6_k141_32218_142 | 149622 | 150296 | - | 1.C.113.1.1 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405857_bin.6_k141_32218 | ShaoY_2019_ERR3405857_bin.6_k141_32218_143 | 150389 | 150841 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405857_bin.6_k141_32218 | ShaoY_2019_ERR3405857_bin.6_k141_32218_144 | 150889 | 151494 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405857_bin.6_k141_32218 | ShaoY_2019_ERR3405857_bin.6_k141_32218_145 | 151873 | 152622 | + | 3.A.1.24.1 |
| TC | ShaoY_2019_ERR3405857_bin.6_k141_32218 | ShaoY_2019_ERR3405857_bin.6_k141_32218_146 | 152615 | 153295 | + | 3.A.1.24.5 |
| TC | ShaoY_2019_ERR3405857_bin.6_k141_32218 | ShaoY_2019_ERR3405857_bin.6_k141_32218_147 | 153393 | 154253 | + | 3.A.1.24.5 |
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_32218_140
Type: CAZyme
Location: 146128 - 147651 (+)
Type: CAZyme
Location: 146128 - 147651 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_32218_141
Type: peptidase
Location: 147742 - 149160 (-)
Type: peptidase
Location: 147742 - 149160 (-)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_32218_142
Type: TC
Location: 149622 - 150296 (-)
Type: TC
Location: 149622 - 150296 (-)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_32218_143
Type:
Location: 150389 - 150841 (+)
Type:
Location: 150389 - 150841 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_32218_144
Type:
Location: 150889 - 151494 (+)
Type:
Location: 150889 - 151494 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_32218_145
Type: TC
Location: 151873 - 152622 (+)
Type: TC
Location: 151873 - 152622 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_32218_146
Type: TC
Location: 152615 - 153295 (+)
Type: TC
Location: 152615 - 153295 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_32218_147
Type: TC
Location: 153393 - 154253 (+)
Type: TC
Location: 153393 - 154253 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Thermophilibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.