Cluster: ShaoY_2019_ERR3405857_bin.6_CGC14

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	ShaoY_2019_ERR3405857_bin.6_k141_19054	ShaoY_2019_ERR3405857_bin.6_k141_19054_59	83745	85004	+	1.I.1.1.3
pfam	ShaoY_2019_ERR3405857_bin.6_k141_19054	ShaoY_2019_ERR3405857_bin.6_k141_19054_60	85021	86283	+	UPF0020 \| TRM5-TYW2_MTfase \| Cons_hypoth95 \| MTS \| Methyltrans_SAM \| Methyltransf_31 \| PUA_3
TC	ShaoY_2019_ERR3405857_bin.6_k141_19054	ShaoY_2019_ERR3405857_bin.6_k141_19054_61	86405	87961	+	2.A.14.1.1
pfam	ShaoY_2019_ERR3405857_bin.6_k141_19054	ShaoY_2019_ERR3405857_bin.6_k141_19054_62	87989	88453	-	dCMP_cyt_deam_1 \| MafB19-deam
pfam	ShaoY_2019_ERR3405857_bin.6_k141_19054	ShaoY_2019_ERR3405857_bin.6_k141_19054_63	88700	89260	+	LemA
CAZyme	ShaoY_2019_ERR3405857_bin.6_k141_19054	ShaoY_2019_ERR3405857_bin.6_k141_19054_64	89555	94633	+	CBM32 \| CBM32 \| CBM32 \| GH20
CAZyme	ShaoY_2019_ERR3405857_bin.6_k141_19054	ShaoY_2019_ERR3405857_bin.6_k141_19054_65	95299	98337	-	GH3
TC	ShaoY_2019_ERR3405857_bin.6_k141_19054	ShaoY_2019_ERR3405857_bin.6_k141_19054_66	98518	100365	+	1.A.26.1.2
TC	ShaoY_2019_ERR3405857_bin.6_k141_19054	ShaoY_2019_ERR3405857_bin.6_k141_19054_67	100365	101783	+	2.A.55.3.6

Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_19054_59
Type: TC
Location: 83745 - 85004 (+)

Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_19054_60
Type: pfam
Location: 85021 - 86283 (+)

Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_19054_61
Type: TC
Location: 86405 - 87961 (+)

Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_19054_62
Type: pfam
Location: 87989 - 88453 (-)

Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_19054_63
Type: pfam
Location: 88700 - 89260 (+)

Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_19054_64
Type: CAZyme
Location: 89555 - 94633 (+)

Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_19054_65
Type: CAZyme
Location: 95299 - 98337 (-)

Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_19054_66
Type: TC
Location: 98518 - 100365 (+)

Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_19054_67
Type: TC
Location: 100365 - 101783 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
ShaoY_2019_ERR3405857_bin.6_k141_19054_62	vegetarian > vegan	1.19044	0.02258