Cluster: ShaoY_2019_ERR3405857_bin.6_CGC1
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate: host glycan
- Genome ID: ShaoY_2019_ERR3405857_bin.6
- CGC Family ID: CGCFAM_00243
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405857_bin.6_k141_1056 | ShaoY_2019_ERR3405857_bin.6_k141_1056_13 | 15084 | 16880 | + | GH35 |
| TC | ShaoY_2019_ERR3405857_bin.6_k141_1056 | ShaoY_2019_ERR3405857_bin.6_k141_1056_14 | 16883 | 17347 | + | 4.A.6.1.18 |
| TC | ShaoY_2019_ERR3405857_bin.6_k141_1056 | ShaoY_2019_ERR3405857_bin.6_k141_1056_15 | 17439 | 18344 | + | 4.A.6.1.18 |
| TC | ShaoY_2019_ERR3405857_bin.6_k141_1056 | ShaoY_2019_ERR3405857_bin.6_k141_1056_16 | 18334 | 19152 | + | 4.A.6.1.18 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405857_bin.6_k141_1056 | ShaoY_2019_ERR3405857_bin.6_k141_1056_17 | 19305 | 19922 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405857_bin.6_k141_1056 | ShaoY_2019_ERR3405857_bin.6_k141_1056_18 | 20024 | 20452 | + | 4.A.6.1.1 |
| TF | ShaoY_2019_ERR3405857_bin.6_k141_1056 | ShaoY_2019_ERR3405857_bin.6_k141_1056_19 | 20517 | 21248 | + | GntR |
| STP | ShaoY_2019_ERR3405857_bin.6_k141_1056 | ShaoY_2019_ERR3405857_bin.6_k141_1056_20 | 21309 | 22475 | + | SIS |
| CAZyme | ShaoY_2019_ERR3405857_bin.6_k141_1056 | ShaoY_2019_ERR3405857_bin.6_k141_1056_21 | 22634 | 23800 | + | CE9 |
| CAZyme | ShaoY_2019_ERR3405857_bin.6_k141_1056 | ShaoY_2019_ERR3405857_bin.6_k141_1056_22 | 24032 | 27649 | + | CBM32 | GH33 |
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_1056_13
Type: CAZyme
Location: 15084 - 16880 (+)
Type: CAZyme
Location: 15084 - 16880 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_1056_14
Type: TC
Location: 16883 - 17347 (+)
Type: TC
Location: 16883 - 17347 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_1056_15
Type: TC
Location: 17439 - 18344 (+)
Type: TC
Location: 17439 - 18344 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_1056_16
Type: TC
Location: 18334 - 19152 (+)
Type: TC
Location: 18334 - 19152 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_1056_17
Type:
Location: 19305 - 19922 (+)
Type:
Location: 19305 - 19922 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_1056_18
Type: TC
Location: 20024 - 20452 (+)
Type: TC
Location: 20024 - 20452 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_1056_19
Type: TF
Location: 20517 - 21248 (+)
Type: TF
Location: 20517 - 21248 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_1056_20
Type: STP
Location: 21309 - 22475 (+)
Type: STP
Location: 21309 - 22475 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_1056_21
Type: CAZyme
Location: 22634 - 23800 (+)
Type: CAZyme
Location: 22634 - 23800 (+)
Gene ID: ShaoY_2019_ERR3405857_bin.6_k141_1056_22
Type: CAZyme
Location: 24032 - 27649 (+)
Type: CAZyme
Location: 24032 - 27649 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Thermophilibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.