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Cluster: ShaoY_2019_ERR3405842_bin.9_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405842_bin.9_k141_182 ShaoY_2019_ERR3405842_bin.9_k141_182_18 19761 21437 + 3.A.1.5.35
TC ShaoY_2019_ERR3405842_bin.9_k141_182 ShaoY_2019_ERR3405842_bin.9_k141_182_19 21594 22631 + 3.A.1.5.37
TC ShaoY_2019_ERR3405842_bin.9_k141_182 ShaoY_2019_ERR3405842_bin.9_k141_182_20 22646 23581 + 3.A.1.5.11
TC ShaoY_2019_ERR3405842_bin.9_k141_182 ShaoY_2019_ERR3405842_bin.9_k141_182_21 23584 24675 + 3.A.1.5.34
TC ShaoY_2019_ERR3405842_bin.9_k141_182 ShaoY_2019_ERR3405842_bin.9_k141_182_22 24676 25704 + 3.A.1.5.36
STP ShaoY_2019_ERR3405842_bin.9_k141_182 ShaoY_2019_ERR3405842_bin.9_k141_182_23 26444 28789 + GAF | SpoIIE
STP ShaoY_2019_ERR3405842_bin.9_k141_182 ShaoY_2019_ERR3405842_bin.9_k141_182_24 28868 29614 + STAS
CAZyme ShaoY_2019_ERR3405842_bin.9_k141_182 ShaoY_2019_ERR3405842_bin.9_k141_182_25 30108 31013 + GH13_30
Gene ID: ShaoY_2019_ERR3405842_bin.9_k141_182_18
Type: TC
Location: 19761 - 21437 (+)
Gene ID: ShaoY_2019_ERR3405842_bin.9_k141_182_19
Type: TC
Location: 21594 - 22631 (+)
Gene ID: ShaoY_2019_ERR3405842_bin.9_k141_182_20
Type: TC
Location: 22646 - 23581 (+)
Gene ID: ShaoY_2019_ERR3405842_bin.9_k141_182_21
Type: TC
Location: 23584 - 24675 (+)
Gene ID: ShaoY_2019_ERR3405842_bin.9_k141_182_22
Type: TC
Location: 24676 - 25704 (+)
Gene ID: ShaoY_2019_ERR3405842_bin.9_k141_182_23
Type: STP
Location: 26444 - 28789 (+)
Gene ID: ShaoY_2019_ERR3405842_bin.9_k141_182_24
Type: STP
Location: 28868 - 29614 (+)
Gene ID: ShaoY_2019_ERR3405842_bin.9_k141_182_25
Type: CAZyme
Location: 30108 - 31013 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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