dbCAN HGM

Cluster: ShaoY_2019_ERR3405842_bin.9_CGC14

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	ShaoY_2019_ERR3405842_bin.9_k141_2271	ShaoY_2019_ERR3405842_bin.9_k141_2271_75	78482	78925	+	4.A.6.1.16
pfam	ShaoY_2019_ERR3405842_bin.9_k141_2271	ShaoY_2019_ERR3405842_bin.9_k141_2271_76	78925	79206	+	YajC
TC	ShaoY_2019_ERR3405842_bin.9_k141_2271	ShaoY_2019_ERR3405842_bin.9_k141_2271_77	79243	79725	+	4.A.6.1.4
TC	ShaoY_2019_ERR3405842_bin.9_k141_2271	ShaoY_2019_ERR3405842_bin.9_k141_2271_78	79816	80616	+	4.A.6.1.4
TC	ShaoY_2019_ERR3405842_bin.9_k141_2271	ShaoY_2019_ERR3405842_bin.9_k141_2271_79	80606	81688	+	4.A.6.1.4
TF	ShaoY_2019_ERR3405842_bin.9_k141_2271	ShaoY_2019_ERR3405842_bin.9_k141_2271_80	81873	82604	+	GntR
STP	ShaoY_2019_ERR3405842_bin.9_k141_2271	ShaoY_2019_ERR3405842_bin.9_k141_2271_81	82719	83885	+	SIS \| SIS
CAZyme	ShaoY_2019_ERR3405842_bin.9_k141_2271	ShaoY_2019_ERR3405842_bin.9_k141_2271_82	84005	85174	+	CE9

Gene ID: ShaoY_2019_ERR3405842_bin.9_k141_2271_75
Type: TC
Location: 78482 - 78925 (+)

Gene ID: ShaoY_2019_ERR3405842_bin.9_k141_2271_76
Type: pfam
Location: 78925 - 79206 (+)

Gene ID: ShaoY_2019_ERR3405842_bin.9_k141_2271_77
Type: TC
Location: 79243 - 79725 (+)

Gene ID: ShaoY_2019_ERR3405842_bin.9_k141_2271_78
Type: TC
Location: 79816 - 80616 (+)

Gene ID: ShaoY_2019_ERR3405842_bin.9_k141_2271_79
Type: TC
Location: 80606 - 81688 (+)

Gene ID: ShaoY_2019_ERR3405842_bin.9_k141_2271_80
Type: TF
Location: 81873 - 82604 (+)

Gene ID: ShaoY_2019_ERR3405842_bin.9_k141_2271_81
Type: STP
Location: 82719 - 83885 (+)

Gene ID: ShaoY_2019_ERR3405842_bin.9_k141_2271_82
Type: CAZyme
Location: 84005 - 85174 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
ShaoY_2019_ERR3405842_bin.9_k141_2271_76	vegan > omnivore	1.03080	0.00776