Cluster: ShaoY_2019_ERR3405831_bin.2_CGC97
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405831_bin.2_k141_5256 | ShaoY_2019_ERR3405831_bin.2_k141_5256_186 | 255307 | 256056 | - | 3.A.1.124.2 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_5256 | ShaoY_2019_ERR3405831_bin.2_k141_5256_187 | 256053 | 256814 | - | 3.A.1.124.2 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_5256 | ShaoY_2019_ERR3405831_bin.2_k141_5256_188 | 256814 | 257515 | - | 3.A.1.124.6 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_5256 | ShaoY_2019_ERR3405831_bin.2_k141_5256_189 | 257792 | 260833 | - | GH2 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_5256 | ShaoY_2019_ERR3405831_bin.2_k141_5256_190 | 260875 | 262635 | - | 8.A.59.2.1 |
| TF | ShaoY_2019_ERR3405831_bin.2_k141_5256 | ShaoY_2019_ERR3405831_bin.2_k141_5256_191 | 262642 | 264171 | - | HTH_AraC |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_5256 | ShaoY_2019_ERR3405831_bin.2_k141_5256_192 | 264326 | 265168 | - | 3.A.1.1.4 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_5256 | ShaoY_2019_ERR3405831_bin.2_k141_5256_193 | 265165 | 266031 | - | 3.A.1.1.4 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_5256 | ShaoY_2019_ERR3405831_bin.2_k141_5256_194 | 266094 | 267503 | - | 3.A.1.1.4 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_186
Type: TC
Location: 255307 - 256056 (-)
Type: TC
Location: 255307 - 256056 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_187
Type: TC
Location: 256053 - 256814 (-)
Type: TC
Location: 256053 - 256814 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_188
Type: TC
Location: 256814 - 257515 (-)
Type: TC
Location: 256814 - 257515 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_189
Type: CAZyme
Location: 257792 - 260833 (-)
Type: CAZyme
Location: 257792 - 260833 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_190
Type: TC
Location: 260875 - 262635 (-)
Type: TC
Location: 260875 - 262635 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_191
Type: TF
Location: 262642 - 264171 (-)
Type: TF
Location: 262642 - 264171 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_192
Type: TC
Location: 264326 - 265168 (-)
Type: TC
Location: 264326 - 265168 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_193
Type: TC
Location: 265165 - 266031 (-)
Type: TC
Location: 265165 - 266031 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_194
Type: TC
Location: 266094 - 267503 (-)
Type: TC
Location: 266094 - 267503 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.