Cluster: ShaoY_2019_ERR3405831_bin.2_CGC96
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- CGC Family ID: CGCFAM_07589
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_5256 | ShaoY_2019_ERR3405831_bin.2_k141_5256_172 | 234667 | 238767 | - | GH30_5 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_5256 | ShaoY_2019_ERR3405831_bin.2_k141_5256_173 | 238933 | 242571 | - | GH43_24 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405831_bin.2_k141_5256 | ShaoY_2019_ERR3405831_bin.2_k141_5256_174 | 242766 | 243704 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_5256 | ShaoY_2019_ERR3405831_bin.2_k141_5256_175 | 244034 | 244708 | + | 9.B.20.1.4 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_172
Type: CAZyme
Location: 234667 - 238767 (-)
Type: CAZyme
Location: 234667 - 238767 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_173
Type: CAZyme
Location: 238933 - 242571 (-)
Type: CAZyme
Location: 238933 - 242571 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_174
Type:
Location: 242766 - 243704 (-)
Type:
Location: 242766 - 243704 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_175
Type: TC
Location: 244034 - 244708 (+)
Type: TC
Location: 244034 - 244708 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.