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Cluster: ShaoY_2019_ERR3405831_bin.2_CGC95

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_5256 ShaoY_2019_ERR3405831_bin.2_k141_5256_151 208318 210216 + GH2
TC ShaoY_2019_ERR3405831_bin.2_k141_5256 ShaoY_2019_ERR3405831_bin.2_k141_5256_152 210252 211646 + 2.A.2.3.1
pfam ShaoY_2019_ERR3405831_bin.2_k141_5256 ShaoY_2019_ERR3405831_bin.2_k141_5256_153 211639 212556 + Hydrolase | HAD_2
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_5256 ShaoY_2019_ERR3405831_bin.2_k141_5256_154 212569 214266 + GH3
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_5256 ShaoY_2019_ERR3405831_bin.2_k141_5256_155 214386 216164 + GH2
TC ShaoY_2019_ERR3405831_bin.2_k141_5256 ShaoY_2019_ERR3405831_bin.2_k141_5256_156 216328 216999 - 9.B.158.1.3
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_151
Type: CAZyme
Location: 208318 - 210216 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_152
Type: TC
Location: 210252 - 211646 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_153
Type: pfam
Location: 211639 - 212556 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_154
Type: CAZyme
Location: 212569 - 214266 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_155
Type: CAZyme
Location: 214386 - 216164 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_156
Type: TC
Location: 216328 - 216999 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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