Cluster: ShaoY_2019_ERR3405831_bin.2_CGC93
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_5256 | ShaoY_2019_ERR3405831_bin.2_k141_5256_116 | 154486 | 158313 | - | GH36 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_5256 | ShaoY_2019_ERR3405831_bin.2_k141_5256_117 | 158413 | 162180 | - | GH98 |
| pfam | ShaoY_2019_ERR3405831_bin.2_k141_5256 | ShaoY_2019_ERR3405831_bin.2_k141_5256_118 | 162384 | 162917 | - | CobA_CobO_BtuR |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_5256 | ShaoY_2019_ERR3405831_bin.2_k141_5256_119 | 163080 | 164144 | - | 9.A.23.1.1 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_116
Type: CAZyme
Location: 154486 - 158313 (-)
Type: CAZyme
Location: 154486 - 158313 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_117
Type: CAZyme
Location: 158413 - 162180 (-)
Type: CAZyme
Location: 158413 - 162180 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_118
Type: pfam
Location: 162384 - 162917 (-)
Type: pfam
Location: 162384 - 162917 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_119
Type: TC
Location: 163080 - 164144 (-)
Type: TC
Location: 163080 - 164144 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.