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Cluster: ShaoY_2019_ERR3405831_bin.2_CGC91

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_5256 ShaoY_2019_ERR3405831_bin.2_k141_5256_61 71484 73760 - GH3
TF ShaoY_2019_ERR3405831_bin.2_k141_5256 ShaoY_2019_ERR3405831_bin.2_k141_5256_62 73816 75405 - HTH_AraC
TC ShaoY_2019_ERR3405831_bin.2_k141_5256 ShaoY_2019_ERR3405831_bin.2_k141_5256_63 75463 77343 - 9.B.33.1.1
TC ShaoY_2019_ERR3405831_bin.2_k141_5256 ShaoY_2019_ERR3405831_bin.2_k141_5256_64 77382 78284 - 3.A.1.1.29
TC ShaoY_2019_ERR3405831_bin.2_k141_5256 ShaoY_2019_ERR3405831_bin.2_k141_5256_65 78445 79368 - 3.A.1.1.10
pfam ShaoY_2019_ERR3405831_bin.2_k141_5256 ShaoY_2019_ERR3405831_bin.2_k141_5256_66 79452 81005 - DUF3502
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_5256 ShaoY_2019_ERR3405831_bin.2_k141_5256_67 81298 86382 - CBM66 | GH127
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_61
Type: CAZyme
Location: 71484 - 73760 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_62
Type: TF
Location: 73816 - 75405 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_63
Type: TC
Location: 75463 - 77343 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_64
Type: TC
Location: 77382 - 78284 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_65
Type: TC
Location: 78445 - 79368 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_66
Type: pfam
Location: 79452 - 81005 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_67
Type: CAZyme
Location: 81298 - 86382 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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