Cluster: ShaoY_2019_ERR3405831_bin.2_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405831_bin.2_k141_1077 | ShaoY_2019_ERR3405831_bin.2_k141_1077_3 | 4601 | 5509 | + | 3.A.1.1.7 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_1077 | ShaoY_2019_ERR3405831_bin.2_k141_1077_4 | 5511 | 6356 | + | 3.A.1.1.25 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_1077 | ShaoY_2019_ERR3405831_bin.2_k141_1077_5 | 6398 | 8398 | + | GH31_4 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1077_3
Type: TC
Location: 4601 - 5509 (+)
Type: TC
Location: 4601 - 5509 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1077_4
Type: TC
Location: 5511 - 6356 (+)
Type: TC
Location: 5511 - 6356 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1077_5
Type: CAZyme
Location: 6398 - 8398 (+)
Type: CAZyme
Location: 6398 - 8398 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.