Cluster: ShaoY_2019_ERR3405831_bin.2_CGC86
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- CGC Family ID: CGCFAM_02071
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405831_bin.2_k141_5020 | ShaoY_2019_ERR3405831_bin.2_k141_5020_57 | 69906 | 70796 | + | 3.A.1.1.42 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_5020 | ShaoY_2019_ERR3405831_bin.2_k141_5020_58 | 70796 | 71662 | + | 3.A.1.1.34 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_5020 | ShaoY_2019_ERR3405831_bin.2_k141_5020_59 | 71740 | 73845 | + | GH36 |
| TF | ShaoY_2019_ERR3405831_bin.2_k141_5020 | ShaoY_2019_ERR3405831_bin.2_k141_5020_60 | 73981 | 75060 | - | HTH_AraC | HTH_AraC |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_5020 | ShaoY_2019_ERR3405831_bin.2_k141_5020_61 | 75282 | 79406 | + | GH106 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5020_57
Type: TC
Location: 69906 - 70796 (+)
Type: TC
Location: 69906 - 70796 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5020_58
Type: TC
Location: 70796 - 71662 (+)
Type: TC
Location: 70796 - 71662 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5020_59
Type: CAZyme
Location: 71740 - 73845 (+)
Type: CAZyme
Location: 71740 - 73845 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5020_60
Type: TF
Location: 73981 - 75060 (-)
Type: TF
Location: 73981 - 75060 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5020_61
Type: CAZyme
Location: 75282 - 79406 (+)
Type: CAZyme
Location: 75282 - 79406 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.