Cluster: ShaoY_2019_ERR3405831_bin.2_CGC84
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- CGC Family ID: CGCFAM_02437
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_4852 | ShaoY_2019_ERR3405831_bin.2_k141_4852_57 | 73990 | 74958 | + | GT2 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405831_bin.2_k141_4852 | ShaoY_2019_ERR3405831_bin.2_k141_4852_58 | 74972 | 75520 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | ShaoY_2019_ERR3405831_bin.2_k141_4852 | ShaoY_2019_ERR3405831_bin.2_k141_4852_59 | 75553 | 78042 | + | C40.UPW |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_4852 | ShaoY_2019_ERR3405831_bin.2_k141_4852_60 | 78126 | 79460 | + | 2.A.40.2.1 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4852_57
Type: CAZyme
Location: 73990 - 74958 (+)
Type: CAZyme
Location: 73990 - 74958 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4852_58
Type:
Location: 74972 - 75520 (+)
Type:
Location: 74972 - 75520 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4852_59
Type: peptidase
Location: 75553 - 78042 (+)
Type: peptidase
Location: 75553 - 78042 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4852_60
Type: TC
Location: 78126 - 79460 (+)
Type: TC
Location: 78126 - 79460 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.