Cluster: ShaoY_2019_ERR3405831_bin.2_CGC79
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405831_bin.2_k141_4615 | ShaoY_2019_ERR3405831_bin.2_k141_4615_6 | 4369 | 5070 | + | 3.A.1.134.11 |
| pfam | ShaoY_2019_ERR3405831_bin.2_k141_4615 | ShaoY_2019_ERR3405831_bin.2_k141_4615_7 | 5067 | 6794 | + | FtsX |
| pfam | ShaoY_2019_ERR3405831_bin.2_k141_4615 | ShaoY_2019_ERR3405831_bin.2_k141_4615_8 | 7085 | 7603 | - | DUF4304 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_4615 | ShaoY_2019_ERR3405831_bin.2_k141_4615_9 | 7868 | 8932 | + | GT2 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4615_6
Type: TC
Location: 4369 - 5070 (+)
Type: TC
Location: 4369 - 5070 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4615_7
Type: pfam
Location: 5067 - 6794 (+)
Type: pfam
Location: 5067 - 6794 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4615_8
Type: pfam
Location: 7085 - 7603 (-)
Type: pfam
Location: 7085 - 7603 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4615_9
Type: CAZyme
Location: 7868 - 8932 (+)
Type: CAZyme
Location: 7868 - 8932 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.