Cluster: ShaoY_2019_ERR3405831_bin.2_CGC78
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_4456 | ShaoY_2019_ERR3405831_bin.2_k141_4456_122 | 157597 | 163740 | + | CBM66 | CBM66 | GH127 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_4456 | ShaoY_2019_ERR3405831_bin.2_k141_4456_123 | 163844 | 164998 | - | GH88 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_4456 | ShaoY_2019_ERR3405831_bin.2_k141_4456_124 | 165019 | 166080 | - | GH117 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_4456 | ShaoY_2019_ERR3405831_bin.2_k141_4456_125 | 166119 | 166949 | - | 3.A.1.1.36 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_4456 | ShaoY_2019_ERR3405831_bin.2_k141_4456_126 | 166964 | 167887 | - | 3.A.1.1.11 |
| STP | ShaoY_2019_ERR3405831_bin.2_k141_4456 | ShaoY_2019_ERR3405831_bin.2_k141_4456_127 | 167969 | 169360 | - | SBP_bac_1 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_4456 | ShaoY_2019_ERR3405831_bin.2_k141_4456_128 | 169621 | 171366 | + | 8.A.59.2.1 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4456_122
Type: CAZyme
Location: 157597 - 163740 (+)
Type: CAZyme
Location: 157597 - 163740 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4456_123
Type: CAZyme
Location: 163844 - 164998 (-)
Type: CAZyme
Location: 163844 - 164998 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4456_124
Type: CAZyme
Location: 165019 - 166080 (-)
Type: CAZyme
Location: 165019 - 166080 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4456_125
Type: TC
Location: 166119 - 166949 (-)
Type: TC
Location: 166119 - 166949 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4456_126
Type: TC
Location: 166964 - 167887 (-)
Type: TC
Location: 166964 - 167887 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4456_127
Type: STP
Location: 167969 - 169360 (-)
Type: STP
Location: 167969 - 169360 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4456_128
Type: TC
Location: 169621 - 171366 (+)
Type: TC
Location: 169621 - 171366 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.