Cluster: ShaoY_2019_ERR3405831_bin.2_CGC73
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- CGC Family ID: CGCFAM_05367
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405831_bin.2_k141_4114 | ShaoY_2019_ERR3405831_bin.2_k141_4114_31 | 31679 | 33547 | - | 3.A.1.2.23 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_4114 | ShaoY_2019_ERR3405831_bin.2_k141_4114_32 | 33537 | 35342 | - | 8.A.59.2.1 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_4114 | ShaoY_2019_ERR3405831_bin.2_k141_4114_33 | 35425 | 36405 | - | 3.A.1.2.14 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_4114 | ShaoY_2019_ERR3405831_bin.2_k141_4114_34 | 36402 | 37433 | - | 3.A.1.2.14 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_4114 | ShaoY_2019_ERR3405831_bin.2_k141_4114_35 | 37417 | 38946 | - | 3.A.1.2.14 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_4114 | ShaoY_2019_ERR3405831_bin.2_k141_4114_36 | 39044 | 40141 | - | 3.A.1.2.14 |
| TF | ShaoY_2019_ERR3405831_bin.2_k141_4114 | ShaoY_2019_ERR3405831_bin.2_k141_4114_37 | 40333 | 41538 | - | HTH_AraC | HTH_AraC |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_4114 | ShaoY_2019_ERR3405831_bin.2_k141_4114_38 | 41729 | 47203 | - | GH43_26 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4114_31
Type: TC
Location: 31679 - 33547 (-)
Type: TC
Location: 31679 - 33547 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4114_32
Type: TC
Location: 33537 - 35342 (-)
Type: TC
Location: 33537 - 35342 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4114_33
Type: TC
Location: 35425 - 36405 (-)
Type: TC
Location: 35425 - 36405 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4114_34
Type: TC
Location: 36402 - 37433 (-)
Type: TC
Location: 36402 - 37433 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4114_35
Type: TC
Location: 37417 - 38946 (-)
Type: TC
Location: 37417 - 38946 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4114_36
Type: TC
Location: 39044 - 40141 (-)
Type: TC
Location: 39044 - 40141 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4114_37
Type: TF
Location: 40333 - 41538 (-)
Type: TF
Location: 40333 - 41538 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4114_38
Type: CAZyme
Location: 41729 - 47203 (-)
Type: CAZyme
Location: 41729 - 47203 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.