Cluster: ShaoY_2019_ERR3405831_bin.2_CGC72
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_4114 | ShaoY_2019_ERR3405831_bin.2_k141_4114_10 | 7163 | 9334 | - | GH112 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_4114 | ShaoY_2019_ERR3405831_bin.2_k141_4114_11 | 9353 | 11158 | - | 8.A.59.2.1 |
| TF | ShaoY_2019_ERR3405831_bin.2_k141_4114 | ShaoY_2019_ERR3405831_bin.2_k141_4114_12 | 11207 | 12727 | - | HTH_AraC | HTH_AraC |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_4114 | ShaoY_2019_ERR3405831_bin.2_k141_4114_13 | 12882 | 13697 | - | 3.A.1.1.48 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_4114 | ShaoY_2019_ERR3405831_bin.2_k141_4114_14 | 13699 | 14607 | - | 3.A.1.1.34 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4114_10
Type: CAZyme
Location: 7163 - 9334 (-)
Type: CAZyme
Location: 7163 - 9334 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4114_11
Type: TC
Location: 9353 - 11158 (-)
Type: TC
Location: 9353 - 11158 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4114_12
Type: TF
Location: 11207 - 12727 (-)
Type: TF
Location: 11207 - 12727 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4114_13
Type: TC
Location: 12882 - 13697 (-)
Type: TC
Location: 12882 - 13697 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4114_14
Type: TC
Location: 13699 - 14607 (-)
Type: TC
Location: 13699 - 14607 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.