Cluster: ShaoY_2019_ERR3405831_bin.2_CGC66
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- CGC Family ID: CGCFAM_00898
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405831_bin.2_k141_3532 | ShaoY_2019_ERR3405831_bin.2_k141_3532_75 | 94295 | 95167 | + | 3.A.1.1.36 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_3532 | ShaoY_2019_ERR3405831_bin.2_k141_3532_76 | 95181 | 96005 | + | 3.A.1.1.41 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_3532 | ShaoY_2019_ERR3405831_bin.2_k141_3532_77 | 96070 | 97866 | + | 8.A.59.2.1 |
| TF | ShaoY_2019_ERR3405831_bin.2_k141_3532 | ShaoY_2019_ERR3405831_bin.2_k141_3532_78 | 97975 | 99018 | + | 0035607 | 0035607 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_3532 | ShaoY_2019_ERR3405831_bin.2_k141_3532_79 | 99128 | 100786 | + | GH29 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3532_75
Type: TC
Location: 94295 - 95167 (+)
Type: TC
Location: 94295 - 95167 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3532_76
Type: TC
Location: 95181 - 96005 (+)
Type: TC
Location: 95181 - 96005 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3532_77
Type: TC
Location: 96070 - 97866 (+)
Type: TC
Location: 96070 - 97866 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3532_78
Type: TF
Location: 97975 - 99018 (+)
Type: TF
Location: 97975 - 99018 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3532_79
Type: CAZyme
Location: 99128 - 100786 (+)
Type: CAZyme
Location: 99128 - 100786 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.