Cluster: ShaoY_2019_ERR3405831_bin.2_CGC63
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- CGC Family ID: CGCFAM_00774
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405831_bin.2_k141_3532 | ShaoY_2019_ERR3405831_bin.2_k141_3532_22 | 29990 | 31033 | - | 3.A.1.2.26 |
| TF | ShaoY_2019_ERR3405831_bin.2_k141_3532 | ShaoY_2019_ERR3405831_bin.2_k141_3532_23 | 31509 | 32357 | - | HTH_AraC |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_3532 | ShaoY_2019_ERR3405831_bin.2_k141_3532_24 | 32664 | 34139 | + | GH29 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3532_22
Type: TC
Location: 29990 - 31033 (-)
Type: TC
Location: 29990 - 31033 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3532_23
Type: TF
Location: 31509 - 32357 (-)
Type: TF
Location: 31509 - 32357 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3532_24
Type: CAZyme
Location: 32664 - 34139 (+)
Type: CAZyme
Location: 32664 - 34139 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.