Cluster: ShaoY_2019_ERR3405831_bin.2_CGC61
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405831_bin.2_k141_3336 | ShaoY_2019_ERR3405831_bin.2_k141_3336_83 | 104255 | 106009 | - | 8.A.59.2.1 |
| TF | ShaoY_2019_ERR3405831_bin.2_k141_3336 | ShaoY_2019_ERR3405831_bin.2_k141_3336_84 | 106006 | 107574 | - | HTH_AraC | HTH_AraC |
| pfam | ShaoY_2019_ERR3405831_bin.2_k141_3336 | ShaoY_2019_ERR3405831_bin.2_k141_3336_85 | 107727 | 108683 | - | Peptidase_C39_2 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_3336 | ShaoY_2019_ERR3405831_bin.2_k141_3336_86 | 108786 | 111047 | - | GT35 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3336_83
Type: TC
Location: 104255 - 106009 (-)
Type: TC
Location: 104255 - 106009 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3336_84
Type: TF
Location: 106006 - 107574 (-)
Type: TF
Location: 106006 - 107574 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3336_85
Type: pfam
Location: 107727 - 108683 (-)
Type: pfam
Location: 107727 - 108683 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3336_86
Type: CAZyme
Location: 108786 - 111047 (-)
Type: CAZyme
Location: 108786 - 111047 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.