Cluster: ShaoY_2019_ERR3405831_bin.2_CGC6
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 6
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_1055 | ShaoY_2019_ERR3405831_bin.2_k141_1055_11 | 14691 | 20468 | - | GH123 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_1055 | ShaoY_2019_ERR3405831_bin.2_k141_1055_12 | 20856 | 22145 | - | GH29 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_1055 | ShaoY_2019_ERR3405831_bin.2_k141_1055_13 | 22187 | 23215 | - | GH18 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_1055 | ShaoY_2019_ERR3405831_bin.2_k141_1055_14 | 23224 | 25755 | - | GH2 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_1055 | ShaoY_2019_ERR3405831_bin.2_k141_1055_15 | 25809 | 27695 | - | GH20 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_1055 | ShaoY_2019_ERR3405831_bin.2_k141_1055_16 | 27836 | 29368 | - | GH29 |
| STP | ShaoY_2019_ERR3405831_bin.2_k141_1055 | ShaoY_2019_ERR3405831_bin.2_k141_1055_17 | 29411 | 31054 | - | SBP_bac_1 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_1055 | ShaoY_2019_ERR3405831_bin.2_k141_1055_18 | 31149 | 32054 | - | 3.A.1.1.10 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_1055 | ShaoY_2019_ERR3405831_bin.2_k141_1055_19 | 32073 | 33023 | - | 3.A.1.1.10 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1055_11
Type: CAZyme
Location: 14691 - 20468 (-)
Type: CAZyme
Location: 14691 - 20468 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1055_12
Type: CAZyme
Location: 20856 - 22145 (-)
Type: CAZyme
Location: 20856 - 22145 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1055_13
Type: CAZyme
Location: 22187 - 23215 (-)
Type: CAZyme
Location: 22187 - 23215 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1055_14
Type: CAZyme
Location: 23224 - 25755 (-)
Type: CAZyme
Location: 23224 - 25755 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1055_15
Type: CAZyme
Location: 25809 - 27695 (-)
Type: CAZyme
Location: 25809 - 27695 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1055_16
Type: CAZyme
Location: 27836 - 29368 (-)
Type: CAZyme
Location: 27836 - 29368 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1055_17
Type: STP
Location: 29411 - 31054 (-)
Type: STP
Location: 29411 - 31054 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1055_18
Type: TC
Location: 31149 - 32054 (-)
Type: TC
Location: 31149 - 32054 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_1055_19
Type: TC
Location: 32073 - 33023 (-)
Type: TC
Location: 32073 - 33023 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.