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Cluster: ShaoY_2019_ERR3405831_bin.2_CGC59

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_3336 ShaoY_2019_ERR3405831_bin.2_k141_3336_15 12526 13704 - GH88
TC ShaoY_2019_ERR3405831_bin.2_k141_3336 ShaoY_2019_ERR3405831_bin.2_k141_3336_16 13774 14601 - 3.A.1.1.36
TC ShaoY_2019_ERR3405831_bin.2_k141_3336 ShaoY_2019_ERR3405831_bin.2_k141_3336_17 14615 15514 - 3.A.1.1.11
TC ShaoY_2019_ERR3405831_bin.2_k141_3336 ShaoY_2019_ERR3405831_bin.2_k141_3336_18 15621 16952 - 3.A.1.1.7
TF ShaoY_2019_ERR3405831_bin.2_k141_3336 ShaoY_2019_ERR3405831_bin.2_k141_3336_19 17130 18743 - HTH_AraC | HTH_AraC
TC ShaoY_2019_ERR3405831_bin.2_k141_3336 ShaoY_2019_ERR3405831_bin.2_k141_3336_20 18758 20542 - 8.A.59.2.1
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3336_15
Type: CAZyme
Location: 12526 - 13704 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3336_16
Type: TC
Location: 13774 - 14601 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3336_17
Type: TC
Location: 14615 - 15514 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3336_18
Type: TC
Location: 15621 - 16952 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3336_19
Type: TF
Location: 17130 - 18743 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3336_20
Type: TC
Location: 18758 - 20542 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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