Cluster: ShaoY_2019_ERR3405831_bin.2_CGC54
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405831_bin.2_k141_2973 | ShaoY_2019_ERR3405831_bin.2_k141_2973_2 | 936 | 2720 | - | 8.A.59.2.1 |
| TF | ShaoY_2019_ERR3405831_bin.2_k141_2973 | ShaoY_2019_ERR3405831_bin.2_k141_2973_3 | 2783 | 3850 | + | HTH_AraC | HTH_AraC |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_2973 | ShaoY_2019_ERR3405831_bin.2_k141_2973_4 | 3895 | 6264 | - | GH31_3 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2973_2
Type: TC
Location: 936 - 2720 (-)
Type: TC
Location: 936 - 2720 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2973_3
Type: TF
Location: 2783 - 3850 (+)
Type: TF
Location: 2783 - 3850 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2973_4
Type: CAZyme
Location: 3895 - 6264 (-)
Type: CAZyme
Location: 3895 - 6264 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.