dbCAN Logo

Cluster: ShaoY_2019_ERR3405831_bin.2_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405831_bin.2_k141_2928 ShaoY_2019_ERR3405831_bin.2_k141_2928_160 188716 191475 - 3.A.3.4.1
NULL(UNKNOWN) ShaoY_2019_ERR3405831_bin.2_k141_2928 ShaoY_2019_ERR3405831_bin.2_k141_2928_161 191678 191806 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_2928 ShaoY_2019_ERR3405831_bin.2_k141_2928_162 192282 193697 - GH1
pfam ShaoY_2019_ERR3405831_bin.2_k141_2928 ShaoY_2019_ERR3405831_bin.2_k141_2928_163 193697 194620 - ROK
pfam ShaoY_2019_ERR3405831_bin.2_k141_2928 ShaoY_2019_ERR3405831_bin.2_k141_2928_164 194659 195582 - IU_nuc_hydro | Sde182_NH-like
TC ShaoY_2019_ERR3405831_bin.2_k141_2928 ShaoY_2019_ERR3405831_bin.2_k141_2928_165 195569 196972 - 2.A.2.3.3
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2928_160
Type: TC
Location: 188716 - 191475 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2928_161
Type:
Location: 191678 - 191806 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2928_162
Type: CAZyme
Location: 192282 - 193697 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2928_163
Type: pfam
Location: 193697 - 194620 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2928_164
Type: pfam
Location: 194659 - 195582 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2928_165
Type: TC
Location: 195569 - 196972 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List