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Cluster: ShaoY_2019_ERR3405831_bin.2_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_2928 ShaoY_2019_ERR3405831_bin.2_k141_2928_34 44166 45512 - GH4
TC ShaoY_2019_ERR3405831_bin.2_k141_2928 ShaoY_2019_ERR3405831_bin.2_k141_2928_35 45548 46375 - 3.A.1.1.18
TC ShaoY_2019_ERR3405831_bin.2_k141_2928 ShaoY_2019_ERR3405831_bin.2_k141_2928_36 46372 47271 - 3.A.1.1.36
STP ShaoY_2019_ERR3405831_bin.2_k141_2928 ShaoY_2019_ERR3405831_bin.2_k141_2928_37 47308 48738 - SBP_bac_1
TF ShaoY_2019_ERR3405831_bin.2_k141_2928 ShaoY_2019_ERR3405831_bin.2_k141_2928_38 48993 50555 - HTH_AraC | HTH_AraC
TC ShaoY_2019_ERR3405831_bin.2_k141_2928 ShaoY_2019_ERR3405831_bin.2_k141_2928_39 50595 52424 - 8.A.59.2.1
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2928_34
Type: CAZyme
Location: 44166 - 45512 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2928_35
Type: TC
Location: 45548 - 46375 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2928_36
Type: TC
Location: 46372 - 47271 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2928_37
Type: STP
Location: 47308 - 48738 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2928_38
Type: TF
Location: 48993 - 50555 (-)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_2928_39
Type: TC
Location: 50595 - 52424 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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