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Cluster: ShaoY_2019_ERR3405831_bin.2_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_906 ShaoY_2019_ERR3405831_bin.2_k141_906_21 28443 30479 + GH31_3
NULL(UNKNOWN) ShaoY_2019_ERR3405831_bin.2_k141_906 ShaoY_2019_ERR3405831_bin.2_k141_906_22 30516 31787 + NULL(UNKNOWN)
[View Structural Homologs]
STP ShaoY_2019_ERR3405831_bin.2_k141_906 ShaoY_2019_ERR3405831_bin.2_k141_906_23 31888 33315 + SBP_bac_1
TC ShaoY_2019_ERR3405831_bin.2_k141_906 ShaoY_2019_ERR3405831_bin.2_k141_906_24 33387 34268 + 3.A.1.1.20
TC ShaoY_2019_ERR3405831_bin.2_k141_906 ShaoY_2019_ERR3405831_bin.2_k141_906_25 34279 35106 + 3.A.1.1.39
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_906 ShaoY_2019_ERR3405831_bin.2_k141_906_26 35123 36199 + GH172
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_906_21
Type: CAZyme
Location: 28443 - 30479 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_906_22
Type:
Location: 30516 - 31787 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_906_23
Type: STP
Location: 31888 - 33315 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_906_24
Type: TC
Location: 33387 - 34268 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_906_25
Type: TC
Location: 34279 - 35106 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_906_26
Type: CAZyme
Location: 35123 - 36199 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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